Autodock Tools (https://ccsb.scripps.edu/mgltools/) is a suite of programs for preparing and visualizing files for molecular docking mostly for Autodock (https://autodock.scripps.edu).

In this video I'll show you how to install ADT on Windows and how to use it to prepare a ligand and a receptor for docking.

I do hope you find it useful.

Note, ADT has an interface to run autogrid and autodock. However, I could not get it to work. Autogrid4 and autodock4 do work when using them from the command line.